A1AT; Alpha-1 Antitrypsin; AAT; Alpha-1 Protease Inhibitor (PI) Mutation; AAT Deficiency; Alpha-1 Antitrypsin Genotype; AAT Genotype, Mutation
Alpha-1-Antitrypsin Genotype, Serum and Whole Blood
Test
Aliases/Synonyms
Method
Various
Method Description
Genotyping: PCR
Phenotyping: IEF
Report Includes
A1AT genotype; Alpha 1 Antitrypsin Phenotype
Specimens
Mandatory Clinical Information must be submitted with this information sheet.
Clinical Utility
Testing eligibility
Serum A1AT concentration must be provided to order this test.
Testing is only available if one or more of the following is/are applicable.
- Serum A1AT concentration is ≤ 1.15 g/L.
- There is a documented family history of A1AT deficiency.
- There is liver disease and A1AT concentration is < 1.50 g/L.
- The patient has COPD that is unusually severe and unexplained.
Reflex Test Protocol
- Targeted Genotyping by melting curve analysis for Z and S variants.
No further testing is done if the preliminary diagnostic test result agrees with the serum A1AT level. - Phenotype by Isoelectric Focussing (IFE) is performed if there is:
- A discordance between the serum/clinical phenotype and the targeted genotype
- Targeted genotype is MZ (to allow detection of FZ)
- When the testing is ordered for prenatal counselling
- Gene Sequencing will be performed when the clinical information/targeted genotyping/IFE suggest M Malton or another rare allele not detectable by targeted genotyping or IFE.
Additional information is also available here.
Test Location
St. Paul's Hospital Laboratory, 1081 Burrard St, Vancouver, BC V6Z 1Y6
Test Version
17-Nov-2023
Specimen
Specimens
Mandatory Clinical Information must be submitted with this information sheet.
Collection Containers
Red top (no additive) and Lavender top (EDTA)
Sample Volume
Serum : 0.5 mL
Whole Blood: 2.0 mL
Minimum Volume
Serum: 0.1 mL
Whole Blood: 0.5 mL
Collection & Handling
Handling Information
Whole blood: To avoid DNA contamination, whole blood should be submitted in original collection tube and should not be decanted from original collection tube.
Serum: Spin, separate and aliquot to a transfer vial.
Store and send both whole blood and serum frozen.
Stability
Ambient | 21 days |
---|---|
Refrigerated | 30 days |
Frozen | 30 days |
Test Version
17-Nov-2023
Performance / Interpretation
Method
Various
Method Description
Genotyping: PCR
Phenotyping: IEF
Turnaround Time
28 days
Results
Name | Units | Reference Range | Conversion Factor | |
---|---|---|---|---|
Alpha-1 Antitrypsin Genotyping |
|
|||
Sample Reports
Test Location
St. Paul's Hospital Laboratory, 1081 Burrard St, Vancouver, BC V6Z 1Y6
Test Version
17-Nov-2023
Interface / Setup
HL7 Interface Codes
Order Code | Result Codes | Units |
---|---|---|
(Not Interfaced) | Note: Results for this test are reported as an Adobe Acrobat pdf-format file. |
Sample Reports
Test Version
17-Nov-2023